| Linkage group | Locus | Gene / marker description | References | Accession # |
| I | CYP1 | cyclophilin 1 | Somanchi and Moroney (1999) | AF052206 |
| I | OPSIN1 | chlamyopsin 1 | Deininger et al. (1995) | Z48968 |
| I | TCTEX1 | 14 kDa dynein light chain | Harrison et al. (1998) | AF039437 |
| I | LF3 | LF3 / ULF1gene | L.-W. Tam and P. Lefebvre, unpublished results | |
| I | GP387 | random genomic fragment | This study | |
| I | CNA13 | cDNA fragment | This study | |
| I | GP123 | random genomic fragment | This study | AF525919 |
| I | GP396B | random genomic fragment | This study | |
| I | PC1 | NADPH:protochlorophyllide oxidoreductase | Li and Timko (1996) | U36752 |
| I | ARG7 | argininosuccinate lyase | Debuchy et al. (1989) | X16619 |
| I | PBT302 | genomic fragment | B. Tailon and J. Jarvik, unpublished results | |
| I | CNC41 | cDNA corresponding to EST 1031062D08 | This study | BI722495 |
| I | CNA79 | cDNA corresponding to EST 1031013A09 | This study | BI994521 |
| I | GBP1 | G-strand binding protein | Petracek et al. (1994) | U10442 |
| I | RB47 | poly(A) binding protein | Yohn et al. (1998) | AF043297 |
| I | CNA73 | cDNA corresponding to EST 894090B12 | This study | BE726259 |
| I | GAS96 | gene expressed during cell differentiation | C. F. Beck, unpublished results | |
| I | COX2B | cytochrome c oxidase subunit II | Perez-Martinez et al. (2001) | AF305540 |
| I | LC4 | LC4, 17 kDa dynein light chain | King and Patel - King (1995a) | U34345 |