| Linkage Group | Locus /Gene Name | Probe, Gene or Gene Product | References | Accession # |
| X | GP359 | random genomic fragment | This study | |
| X | GP39 | random genomic fragment | This study | |
| X | KAT | p60 katanin subunit | Lohret et al. (1999) | AF205377 |
| X | PF24 | PF24 gene | P. Yang and W. Sale, unpublished results | |
| X | GP441 | random genomic fragment | This study | |
| X | GP204 | random genomic fragment | This study | |
| X | CNC72 | cDNA fragment | This study | |
| X | PF6 | PF6 gene | G. Rupp and M. Porter, unpublished results | |
| X | GP220 | random genomic fragment | This study | AF525922 |
| X | GP350 | random genomic fragment | This study | AF525921 |
| X | GP145 | random genomic fragment | This study | AF525920 |
| X | CNA83 | cDNA corresponding to EST 1031072D11 | This study | BI724522 |
| X | CNA26 | cDNA corresponding to EST AV634482 | This study; Asamizu et al. (1999) | AV634482 |
| X | GP52 | random genomic fragment | This study |