From Susan Dutcher:
The Chlamydomonas gene-finder, GreenGenie2, is now online. It was trained on Chlamydomonas EST sequences and shows excellent short-sequence prediction accuracy. Input sequences are limited to 150Kb. It has several new user-friendly features. (Kwan, Kulp, Dutcher, and Stormo, (2009) BMC Genomics 10: 210).
-Exon highlighting and underlining (for black and white printing)
-Translated amino acid sequence in output
-Optional automated generation of JGI custom track code
-Output sequences are searchable across line breaks in-browser
It is available at http://bifrost.wustl.edu/GreenGenie2