LINKAGE GROUP XII/XIII

This table contains molecular mapping data from the Silflow-Lefebvre laboratory at the University of Minnesota.
Asterisks denote BAC clones at the end of a contig.

LG MAPPED MARKER ACCESSION # v2.0 SCAFFOLD v3.0 SCAFFOLD CONTIG SIZE OVERLAP WITH SCREENED BY BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC BAC
XII/XIII GAPC L27669 115 88 77.5 kb Silflow/Lefebvre 10k20 10n21 13p16 17n9 30e20 30e21
XII/XIII IDA1, PF9 U61364 115 88 154 kb IDA1/PF9 contig (154kb) Silflow/Lefebvre 13o15 13p15 15j6 17e12* 1n24 23g8* 26n7 2n15
XII/XIII CNB20 AF486824 115 88 IDA1/PF9 contig (154kb) Silflow/Lefebvre 17e12* 2n15
XII/XIII CNC54 IDA1/PF9 contig (154kb) Silflow/Lefebvre 17e12* 2n15
XII/XIII CNA10 90 kb Silflow/Lefebvre 30d10*
XII/XIII PSR1 AF174532 74 56 76 kb PSR1 contig (164kb) Silflow/Lefebvre 15a8 1b6 21f6
XII/XIII IDA4 Z48059 74 56 139 kb PSR1 contig (164kb) Silflow/Lefebvre 10h5 11b9 15a8 1b6 21k12 33n4
XII/XIII LF2 74 56 123 kb PSR1 contig (164kb) Silflow/Lefebvre 10h5 13g5 22g4 25h17 32a11 33n4
XII/XIII CNC8 BI873562 63 11 182.5 kb Silflow/Lefebvre 16j18 17j24 22h22 24h6 24j21* 27b5 28k17 2c18* 31f10 34f7 35g6
XII/XIII CNC53 BE725171 49 11 136 kb GSK3 contig (162kb) Silflow/Lefebvre 17p23* 21f3 21o2 24n2* 27n12 33n6 34c23 34j15
XII/XIII GSK3 AV392622 49 11 162 kb CNC53 contig (136kb) Silflow/Lefebvre 19j24* 21f3* 22l20 23g19 24i24 24n2 34c18
XII/XIII GP330 151 kb GP330 contig (202kb) Silflow/Lefebvre 14j8 14o11 15f19 19g21 25m2* 26f7 28h7 34h17 34o24
XII/XIII M63 151 kb GP330 contig (202kb) Silflow/Lefebvre 15f19 19g21 25m2* 26f7 28h7 34h17 34o24
XII/XIII EYE2 AF233430 49 11 134 kb GP330 contig (202kb) Silflow/Lefebvre 13g10 14o15 19g21 25a1* 26f7
XII/XIII CTH1 AF337037 49 11 107 kb CTH1 contig (107 kb) Silflow/Lefebvre 13g10 14k1 19p10 25a1* 25l15 28l22 29m23 30b1 35h16
XII/XIII PTX4 CTH1 contig (107 kb) Silflow/Lefebvre 13g10 14k1 22o17 23p14 29m23 30b1 32e4 36c14*
XII/XIII GP31 37 11 ODA6 contig (148kb) Silflow/Lefebvre 16e6 19c4 31f12
XII/XIII ODA6 X55382 37 11 148 kb ODA6 contig (148kb) Silflow/Lefebvre 14p10 16e6 25a23 31f12
XII/XIII SAC3 AF100162 101 11 Silflow/Lefebvre none
XII/XIII GP346D AY398642 16 89,83 100 kb Silflow/Lefebvre
XII/XIII IC138 16 31 121 kb Silflow/Lefebvre 17c8 23k17 29i21 32d15
XII/XIII GP227 AY398643 16 31 122 kb Silflow/Lefebvre 34l6
XII/XIII GP399 AY398637 38, 129 31 123 kb Silflow/Lefebvre 10g7 12n18 15b3 17l7* 20b19 20j7 22m10 23o12 24e5 26d20* 26l1 2m13 2p13 31e23 31k3 33n20 34k1
XII/XIII ODA12 U89649 38 31 96 kb Silflow/Lefebvre 11c15 13j24 16p19 21e18 24j5 30k9 30n8
XII/XIII LC3 U43610 38 31 98 kb Silflow/Lefebvre 11i17 11l13 18g14 19k7 21d1 24n22 26d24 26p16 33d7
XII/XIII ALK AF199021 38 31 69 kb Silflow/Lefebvre 10m20 11c7* 17c21* 1e24 22j19 23g14 24a5 26o6 30l22
XII/XIII GS2 U46208 38 18 144 kb Silflow/Lefebvre 20b24 22n13* 28j5* 28o4 34b16
XII/XIII ODA9 U19120 96 18 79 kb Silflow/Lefebvre 32h19
XII/XIII 14-3-3 X79445 109 80 106 kb Silflow/Lefebvre 24h8*
XII/XIII LAO1 U78797 88 20 196 kb LAO1 contig (196kb) Silflow/Lefebvre 10m8 18g24 19h24* 22f6 28i24 2c23 30l21 33p9 34i11 35f23
XII/XIII OEE2 M15187 88 20 LAO1 contig (196kb) Silflow/Lefebvre 10m8 12c17 15l18 16i17 19h24* 2i6 31m4 33p9
XII/XIII CP26 AB050007 53 28 LAO1 contig (196kb) Silflow/Lefebvre 10m8 12c17 15l18 16i17 19h24* 2i6 33p9
XII/XIII EST 925006F07 BE441535 7 20 TUB2 Silflow/Lefebvre 13b16 1e14 1g11 1h15 24f4 28a3 28b3 28f1 32o20 34c17
XII/XIII TUB2 K03281 7 20 152 kb EST 925006F07 Silflow/Lefebvre 12a12 13b16 14d1 16g18 1a12 24f4* 27k24 29b4
XII/XIII RDB BG858985 7 20 119 kb Silflow/Lefebvre 13b13 18c15 20i20* 32m11* 33c11
XII/XIII GP114 7 20 198 kb Silflow/Lefebvre 10d11 21a16 26j11 27n24
XII/XIII CNC63 7 20 166 kb CNC63 contig (166 kb) Silflow/Lefebvre 14a22 25o9
XII/XIII TUB1 M10064 7 20 CNC63 contig (166 kb) Silflow/Lefebvre 14a22 17k19 25o9 26k14 26o10 33f14
XII/XIII EST 925007C10 BE441623 7 20 CNC63 contig (166 kb) Silflow/Lefebvre 14a22 17k19 24e4 25o9 26k14 26o10 33f14
 

This linkage group is continued on the next page


Last updated on June 15, 2006
By Nancy Haas nancy-h@biosci.cbs.umn.edu

Back to list of linkage groups